The additional problem is whether many of those charges are repeat charges. The 'prosecution' will need to weigh each charge up and, if they're looking to prosecute to the highest degree, see which of them is the worst and carries the highest penalty. Also, how many of the same breach happen in the same accounting period.
As I understand it, if you've been prosecuted for a breach, you can't prosecute for the same type of breach in the same accounting period. I may not have this right though, so those better versed in this can maybe put me right.
I suspect that there will be quite a few that aren't followed up on because of a lack of evidence, so we may see those 116 charges whittled down somewhat.
Now I don't know the score with Football, but arbitration in Construction isn't a hugely drawn out process and, once an arbitrator has made a decision, it's extremely difficult to take it any further, particularly if 2 independent bodies have arrived at the same conclusion. If City were to take it to high court, it's highly likely that the court will throw it out as a waste of taxpayers money. I'm not 100% sure though, as Football isn't necessarily the same as Construction when it comes to legal proceedings.